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Question: Map Reads to OTU
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gravatar for jim.turton
23 months ago by
jim.turton • 10
jim.turton • 10 wrote:

I am currently working through an old protocol for performing 16s rRNA Metagenomics analysis, Introductory Tutorial on Galaxy. I have so far successfully completed Sections 1-3. However, now at Section 4, the tutorial indicates I need to use the "Map Reads to OTU" tool. Presumably this tutorial is for Galaxy v1.1.3.1 and I can't find the equivalent tool in v1.9.7.0.

Any help or pointers would be gratefully received.

James
metagenomics • 667 views
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modified 23 months ago • written 23 months ago by jim.turton • 10

Which exact protocol are you following (link please)? Which Galaxy server are you working on (URL please)?

The versions mentioned do not map to Galaxy releases. They could be tool versions.

Thanks for the extra information. Jen, Galaxy team

ADD REPLY • link written 23 months ago by Jennifer Hillman Jackson ♦ 25k
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gravatar for jim.turton
23 months ago by
jim.turton • 10
jim.turton • 10 wrote:

Good morning,

Thank you for your reply.

I am using this protocol -

http://galaxy-qld-old.genome.edu.au/u/qfab/w/tutorial-metagenomics-16s-rrna-analysis

Server -

https://usegalaxy.org/

The tool versions I am using I posted in my original question, I guess these could be tools provided by individual Galaxy users and uploaded for previous Galaxy releases. Kind regards,

James
ADD COMMENT • link written 23 months ago by jim.turton • 10
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