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Question: ped to lped
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gravatar for a.elriedy
2.6 years ago by
a.elriedy • 0
a.elriedy • 0 wrote:

Hi, I have .ped file and .map that i want to upload to galaxy. it reads them as tabular and when i try to change the format to lped to do phenotype analysis, i can not find lped in the format section (the pencil next to the file). So how can i make galaxy read my file to add them to BEAM or GPASS analysis tools
gwa galaxy • 557 views
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modified 2.6 years ago by Jennifer Hillman Jackson ♦ 25k • written 2.6 years ago by a.elriedy • 0
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gravatar for Jennifer Hillman Jackson
2.6 years ago by
Jennifer Hillman Jackson ♦ 25k
United States
Jennifer Hillman Jackson ♦ 25k wrote:

Hello,

The .lped datatype is missing at http://usegalaxy.org and a request to add it has been made here: https://github.com/galaxyproject/galaxy/issues/2127

Thanks for reporting the problem, Jen, Galaxy team
ADD COMMENT • link written 2.6 years ago by Jennifer Hillman Jackson ♦ 25k
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