Question: Quality Score
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gravatar for Amy Boddy
7.8 years ago by
Amy Boddy10
Amy Boddy10 wrote:
Hello, I was wondering how Galaxy calculates the quality score for NGS data? Is there any documentation I could read on how this is calculated? Thanks! -Amy Boddy -- Amy Boddy Ph.D Candidate Center for Molecular Medicine & Genetics Wayne State University School of Medicine 540 E. Canfield, Detroit MI 48201 Website: http://homopan.wayne.edu/ Phone: 313.577.0086 email: aboddy@med.wayne.edu
galaxy • 786 views
ADD COMMENTlink modified 7.8 years ago by Peter Cock1.4k • written 7.8 years ago by Amy Boddy10
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gravatar for Peter Cock
7.8 years ago by
Peter Cock1.4k
European Union
Peter Cock1.4k wrote:
Which quality score are you talking about? Raw reads? Mappings? If it's FASTQ files you mean, may I suggest: http://dx.doi.org/10.1093/nar/gkp1137 and http://en.wikipedia.org/wiki/FASTQ_format Peter
ADD COMMENTlink written 7.8 years ago by Peter Cock1.4k
0
gravatar for Peter Cock
7.8 years ago by
Peter Cock1.4k
European Union
Peter Cock1.4k wrote:
Great :) Don't forget to CC the mailing list in future ;)
ADD COMMENTlink written 7.8 years ago by Peter Cock1.4k
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