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Question: Setting up admin on local galaxy
0
gravatar for ChickenRNA
2.2 years ago by
ChickenRNA • 50
ChickenRNA • 50 wrote:

Dear all, Please help me figure out what went wrong to set up ADMIN in my local instance! This is what I did 1. I changed galaxy.ini.sample file into galaxy.ini
2. Then, I edited galaxy.ini as followed: 

# Administrative users - set this to a comma-separated list of valid Galaxy 
# users (email addresses). These users will have access to the Admin section 
# of the server, and will have access to create users, groups, roles, # libraries, and more. For more information, see: 
# http://wiki.g2.bx.psu.edu/Admin/Interface 
admin_users = My email
  1. I shutdown Galaxy, rerun sh run.sh, log back in Galaxy but still no Admin function.

Am I only suppose to copy the #Administrative users section in the new file?

Any help and guidance will be greatly appreciated.

admin galaxy local • 1.2k views
ADD COMMENT • link •
modified 2.2 years ago by Dannon Baker ♦ 3.7k • written 2.2 years ago by ChickenRNA • 50
3
gravatar for Dannon Baker
2.2 years ago by
Dannon Baker ♦ 3.7k
United States
Dannon Baker ♦ 3.7k wrote:

Exact steps would be:

1) cp config/galaxy.ini.sample config/galaxy.ini (so, in answer to your question, the whole file should be copied)

2) edit the admin_users line by a) uncommenting it, and b) adding your email address exactly. It should look like:

# Administrative users - set this to a comma-separated list of valid Galaxy
# users (email addresses).  These users will have access to the Admin section
# of the server, and will have access to create users, groups, roles,
# libraries, and more.  For more information, see:
#   https://wiki.galaxyproject.org/Admin/Interface
admin_users = foo@foo.com,zip@zap.com

3) kill any running galaxy processes and restart the server (probably just run.sh again)

4) log in (or register) with the email you entered in the line in step 2.

Does any of this seem off from what you did?
ADD COMMENT • link modified 2.2 years ago • written 2.2 years ago by Dannon Baker ♦ 3.7k

Thank you for your prompt response Dannon. Those were the exact steps that I followed, and still no luck.

ADD REPLY • link written 2.2 years ago by ChickenRNA • 50
1

How are you running Galaxy? With it in the foreground as ./run.sh?

ADD REPLY • link written 2.2 years ago by Dannon Baker ♦ 3.7k

Yes, I am new to all this, so not sure what I am doing wrong.

ADD REPLY • link written 2.2 years ago by ChickenRNA • 50
1

What URL are you visiting in the browser? And what are the last lines displayed in the terminal when you start Galaxy with run.sh?

ADD REPLY • link written 2.2 years ago by Dannon Baker ♦ 3.7k

Http:localhost:8080/

and

Starting server in PID 6330. serving on http://127.0.0.1:8080

Thank you so much

ADD REPLY • link written 2.2 years ago by ChickenRNA • 50
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