Hello, I try to install galaxy with a postgresql database. But I get an error with psycopg :
migrate.versioning.repository DEBUG 2016-08-22 15:37:28,538 Repository lib/galaxy/model/migrate loaded successfully migrate.versioning.repository DEBUG 2016-08-22 15:37:28,539 Config: OrderedDict([('db_settings', OrderedDict([('__name__', 'db_settings'), ('repository_id', 'Galaxy'), ('version_table', 'migrate_version'), ('required_dbs', '[]')]))]) Traceback (most recent call last): File "/rapide/Applications/galaxy/lib/galaxy/webapps/galaxy/buildapp.py", line 63, in paste_app_factory app = galaxy.app.UniverseApplication( global_conf=global_conf, **kwargs )
File "/rapide/Applications/galaxy/lib/galaxy/app.py", line 70, in __init__ self._configure_models( check_migrate_databases=True, check_migrate_tools=check_migrate_tools, config_file=config_file )
File "/rapide/Applications/galaxy/lib/galaxy/config.py", line 899, in _configure_models create_or_verify_database( db_url, config_file, self.config.database_engine_options, app=self )
File "/rapide/Applications/galaxy/lib/galaxy/model/migrate/check.py", line 31, in create_or_verify_database engine = create_engine( url, **engine_options )
File "/rapide/Applications/galaxy/.venv/lib/python2.7/site-packages/sqlalchemy/engine/__init__.py", line 386, in create_engine return strategy.create(args, *kwargs)
File "/rapide/Applications/galaxy/.venv/lib/python2.7/site-packages/sqlalchemy/engine/strategies.py", line 75, in create dbapi = dialect_cls.dbapi(**dbapi_args)
File "/rapide/Applications/galaxy/.venv/lib/python2.7/site-packages/sqlalchemy/dialects/postgresql/psycopg2.py", line 579, in dbapi import psycopg2
File "/rapide/Applications/galaxy/.venv/lib/python2.7/site-packages/psycopg2/__init__.py", line 50, in <module> from psycopg2._psycopg import BINARY, NUMBER, STRING, DATETIME, ROWID
ImportError: /rapide/Applications/galaxy/.venv/lib/python2.7/site-packages/psycopg2/_psycopg.so: undefined symbol: PQinitOpenSSL
Could you help me please ?
thanks !
I suspect that this is related.