Question: How to combine genotypes into one VCF file?
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gravatar for avoltz
2.3 years ago by
avoltz • 30
avoltz • 30 wrote:

Hi, I have tried using VCF combine to merge 3 files from 3 different individuals into a single VCF file showing all 3 genotypes, but it doesn't work. I just get back a single genotype instead of all 3. Is there another tool that would be more appropriate? Thanks, Amy

vcfcombine genotypes vcf • 1.3k views
ADD COMMENT • link • modified 2.3 years ago by Jennifer Hillman Jackson ♦ 25k • written 2.3 years ago by avoltz • 30
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gravatar for Jennifer Hillman Jackson
2.3 years ago by
United States
Jennifer Hillman Jackson ♦ 25k wrote:

Hi Amy,

Try the tool VCFannotateGenotypes.

Thanks! Jen, Galaxy team

ADD COMMENT • link written 2.3 years ago by Jennifer Hillman Jackson ♦ 25k
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