Hello,
i have a local installation of galaxy on a ubuntu 16.04 64 bits
I try to run the iPython visualization, but get this error:
127.0.0.1 - - [14/jul/2016:12:35:48 -0300] "GET /api/histories/0a248a1f62a0cc04/contents/datasets/81991b32733a4fc4 HTTP/1.1" 200 - "http://localhost:8081/" "Mozilla/5.0 (X11; Linux x86_64) AppleWebKit/537.36 (KHTML, like Gecko) Chrome/51.0.2704.106 Safari/537.36" galaxy.webapps.galaxy.controllers.visualization ERROR 2016-07-14 12:35:51,527 error rendering visualization (ipython): 'Undefined' object has no attribute 'endswith' Traceback (most recent call last): File "/home/horus/software/galaxy/lib/galaxy/webapps/galaxy/controllers/visualization.py", line 750, in render return plugin.render( trans=trans, embedded=embedded, *kwargs ) File "/home/horus/software/galaxy/lib/galaxy/visualization/plugins/plugin.py", line 135, in render return self._render( render_vars, trans=trans, embedded=embedded ) File "/home/horus/software/galaxy/lib/galaxy/visualization/plugins/plugin.py", line 234, in _render return trans.fill_template( template_filename, template_lookup=self.template_lookup, *render_vars ) File "/home/horus/software/galaxy/lib/galaxy/web/framework/webapp.py", line 858, in fill_template return self.fill_template_mako( filename, *kwargs ) File "/home/horus/software/galaxy/lib/galaxy/web/framework/webapp.py", line 872, in fill_template_mako return template.render( *data ) File "/home/horus/software/galaxy/.venv/lib/python2.7/site-packages/mako/template.py", line 445, in render return runtime._render(self, self.callable_, args, data) File "/home/horus/software/galaxy/.venv/lib/python2.7/site-packages/mako/runtime.py", line 829, in _render *_kwargs_for_callable(callable_, data)) File "/home/horus/software/galaxy/.venv/lib/python2.7/site-packages/mako/runtime.py", line 864, in _render_context _exec_template(inherit, lclcontext, args=args, kwargs=kwargs) File "/home/horus/software/galaxy/.venv/lib/python2.7/site-packages/mako/runtime.py", line 890, in _exec_template callable_(context, *args, *kwargs) File "/home/horus/software/galaxy/database/compiled_templates/ipython.mako.py", line 42, in render_body ie.set_id("ipython") File "/home/horus/software/galaxy/database/compiled_templates/ie.mako.py", line 356, in render_set_id self.attr.our_config_dir = os.path.join(plugin_path, "config") File "/home/horus/software/galaxy/.venv/lib/python2.7/posixpath.py", line 70, in join elif path == '' or path.endswith('/'): AttributeError: 'Undefined' object has no attribute 'endswith'
any help?
