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Question: Multi-Join shows Error
1
gravatar for ana16
2.5 years ago by
ana16 • 20
ana16 • 20 wrote:

Text manipulation -> Multi-Join tool, shows the following error when trying to merge tabular files.

 Can't locate Sort/Key/Natural.pm in @INC (you may need to install the Sort::Key::Natural module) (@INC contains: /galaxy/main/deps/perl/5.18.1/iuc/package_perl_5_18/114b6af405fa/lib/perl5 /galaxy/main/deps/perl/5.18.1/iuc/package_perl_5_18/114b6af405fa/lib/site_perl/5.18.1/x86_64-linux /galaxy/main/deps/perl/5.18.1/iuc/package_perl_5_18/114b6af405fa/lib/site_perl/5.18.1 /galaxy/main/deps/perl/5.18.1/iuc/package_perl_5_18/114b6af405fa/lib/5.18.1/x86_64-linux /galaxy/main/deps/perl/5.18.1/iuc/package_perl_5_18/114b6af405fa/lib/5.18.1 .) at /galaxy/main/shed_tools/toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/37e1eb05b1b4/text_processing/multijoin line 8.
    BEGIN failed--compilation aborted at /galaxy/main/shed_tools/toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/37e1eb05b1b4/text_processing/multijoin line 8.
text manipulation galaxy • 579 views
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modified 2.5 years ago by Jennifer Hillman Jackson ♦ 25k • written 2.5 years ago by ana16 • 20

Thanks for reporting the problem. Testing in progress and more feedback soon. Thank you! Jen, Galaxy team

ADD REPLY • link written 2.5 years ago by Jennifer Hillman Jackson ♦ 25k
2
gravatar for Jennifer Hillman Jackson
2.5 years ago by
Jennifer Hillman Jackson ♦ 25k
United States
Jennifer Hillman Jackson ♦ 25k wrote:

Hello,

I was able to confirm the problem and the ticket requesting to correct the problem is here. I also found one other issue that may be related but I placed this problem in a distinct ticket in case not from the same root cause (it is referenced): https://github.com/galaxyproject/galaxy/issues/2511

Thanks again for reporting the problem. If you only have two datasets to join, the tool Join two files in the same tool group or Join, Subtract and Group > Join two Datasets side by side on a specified field are alternatives until the other correction is made.

Thanks again for reporting the problem, Jen, Galaxy team
ADD COMMENT • link written 2.5 years ago by Jennifer Hillman Jackson ♦ 25k
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