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Question: Job's red even if the outputs are correct
1
gravatar for chaimae0azouggarh
2.5 years ago by
chaimae0azouggarh • 10
chaimae0azouggarh • 10 wrote:

Hey So i've added a new tool to my galaxy and when i run it the job is red (failed) in the error messages i found this

Tool execution generated the following error message:

Loading required package: rJava

Loading required package: methods

Loading required package: xlsxjars

But the outputs are correct how can i fix this :/

jobs errors • 712 views
ADD COMMENT • link •
modified 2.5 years ago by Hotz, Hans-Rudolf • 1.8k • written 2.5 years ago by chaimae0azouggarh • 10

Please include more details so that we can help you:

  • Is this a tool from the Tool Shed?
    • If so, which one?
  • Are you using a local or cloud Galaxy?
    • Running the latest master version (16.04) or another?

  • Is the same tool at http://usegalaxy.org and can the problem be replicated there?

  • Or, is this a tool that you wrote?

  • Did you include automated tests?
    • Do those pass on your instance?
  • Is this the first time you have run this tool?
    • Or has it worked on prior datasets?
ADD REPLY • link written 2.5 years ago by Jennifer Hillman Jackson ♦ 25k
0
gravatar for Hotz, Hans-Rudolf
2.5 years ago by
Hotz, Hans-Rudolf • 1.8k
Switzerland
Hotz, Hans-Rudolf • 1.8k wrote:

Hi

Have a look at this similar thread: A: R job in galaxy (R job in galaxy )

Regards, Hans-Rudolf
ADD COMMENT • link written 2.5 years ago by Hotz, Hans-Rudolf • 1.8k

Thanks a lot ! It was very helpful

ADD REPLY • link written 2.5 years ago by chaimae0azouggarh • 10
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