I know a similar problem has been posted before, but I could not comment on the original post:
I have been getting the following error message while trying to use the Diffbind program on Galaxy Main:
"WARNING: ignoring environment value of R_HOME  "en_US.UTF-8" Loading required package: GenomicRanges Loading required package: methods Loading required package: BiocGenerics Loading required package: parallel Attaching package: 'BiocGenerics' The fo"
I have been using 2 BAM files and 1 BED file per condition for the input (BED file is the Peak File). I have tried using BED files from both "MACS" and "MACS2 peakcall" programs. The output files are always empty and have the same error message.
Any Ideas what I am doing wrong?
Thanks for your help, Jim