hi i hav eperformed data grooming and qc. then mapping the reaads using tophat and assembly using cufflink. i want to know how can i export the output from galaxy in excel or word for some other analysis and also the fasta sequences of aligned reads.
Any dataset can be downloaded. Make sure the data is in readable tabular format, the most accepted transfer format for importing into text manipulation/editing software packages. For example, a compressed BAM dataset should be converted to SAM format ("BAM-to-SAM" in Galaxy or use Samtools line command).
How to download: https://wiki.galaxyproject.org/Support#Downloading_data
Thanks, Jen, Galaxy team