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• Can Anyone tell me how to set mismatch number in ncbi blast of Galaxy ?
  I am trying to blast some plant transcripts but the mismatch always results in 1 or 0 in Galaxy ...
• Re: [Galaxy-Bugs] Gi Errors In The Megablast Table Of Results ?
  Dear Sandrine, Thanks for pointing out this issue. The BLAST databases we have on Galaxy are fro...
• Tools for annotating unknown sequences?
  Dear all, what tools are there in the toolshed suitable to annotate 1000 sequences? (is there a w...
• NCBI BLAST+ on local Galaxy and associated .loc file entries
  Hi, I recently downloaded a local instance of galaxy and added the NCBI BLAST+ tool from the too...
• Blast And Fetching Data From Ncbi
  Hi, I am new to galaxy and I am wondering if it is possible to: 1) Fetch data from NCBI from th...
• Add NCBI BLAST
  I am new to galaxy. I did not configured my galaxy on any local machine. I want to add NCBI BLA...
• Another step to make Trinity output usable with Blast
  I have an output from Trinity that looks like an assembled genome. When I use Blast to check for ...
• Problems with BlastP
  Dear All I am trying to compare two FASTA files using an installed version of BLAST from the too...
• BLASTing on the cloud
  I've not run a stand-alone version of Galaxy, nor a cloud-based one, at present.  However, I have...
• Blast sequence using bacterial genome of ncbi
  Hello, I have installed my galaxy on local server and successfully and added NCBI BLAST plus. I ...
• Blast p error with database definition
  Hello, I am trying to run a blast with my datas. I installed Blast+ package from the tool shed....
• Query Regarding Ncbi Blast+ Blastx
  Hello, I was working with *NCBI BLAST + blastx.*. I have a question regarding one of the columns...
• Blastn: Nameerror: Name 'Cmd' Is Not Defined
  Hello all, First of all I would like to thank you guys for developing and mainting this so usefu...
• NCBI genome to Galaxy
  I am trying to download Brachypodium distachyon strain Bd21 chromosome 2, Brachypodium_distachyo...
• blast and update_blast.pl (nr files): No alias or index file found for protein database
  Good morning I recently download the nr files from ncbi ftp using the update_blastdb.pl script....
• From megablast to megan
  Dear all, I have tried to run megablast recently and get a tabular file. I can't import this file...
• fetch taxonomic representation tool only returns a small subset of original
  I used the NCBI BLAST+ blastn in Galaxy and get a return of approximately the same number of hits...