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• Headers get lost when downloading tabular data
  Hello, when I'm downloading data in tabular format the header row gets lost. Is there a way to ...
• input file types to DESeq on the cloud
  Hi there, I've had a go at using the Ratsch lab DESeq tool but it seems to require your input fi...
• Creating StringTie output that meets DESeq expected input content for DE analysis
  Good Morning, Since StringTie can produce output files for differential expression that can be us...
• adding a header to a tabular file
  Hi, I have tabular file in my history and I would like to add a header to it. What would be the b...
• sam to counts in toolbox
  I am trying to run DEseq with my rna seq data.  I am following the tutorial "http://training.bio...
• Table With Gene Count Reads
  Hello Mike, SAM datasets can be used as tabular data with the Text manipulation, Filter and Sort...
• File Formats In Workflows
  Hi, Was impressed by the Worflow screencasts but when I converted my history to a workflow it fa...
• Biological Replicates on galaxy/ DeSeq analysis
  Hi, I am doing RNA seq analysis and I want to preform Deseq. I have 2 replicates for each condit...
• Display data summary from R code in my galaxy tool
  I have created a galaxy tool, which get the gene expression data. I want to do some gene express...
• Tabular Output Column Headings
  I have a tool that generates tabular output but I don't know how to get the column headings assig...
• Tabular to Excel
  Hi there, I have a cuffdiff output in a TABULAR format file and I'd like to convert it to an exce...
• Headers In Tabular Datatypes
  Deaf galaxy-user, So you can have tabular datasets, and you can add a datatype that subclasses t...
• Creating a sub-format of Tabular with dynamic column naming
  Please can you help us create a sub-format of Tabular that can take column headers from a specif...
• cuffdiff tabular file conversion
  Hello, I just finished running differential expression analysis using cuffdiff. The end result i...
• annotations with genome of reference
  hi, Dears I am working with RNA-seq and i dont understand how create a de novo transcriptome usi...
• Do I Need To Specify The File Format When I Upload Datasets Using Ftp Method?
  Hi Everyone, When I upload my datasets onto my history via FTP method (using FileZilla), do I ne...
• Small Rna Mapping
  Dear Galaxy Team, I was recently pointed to your website to analyse my NGS data, my primary inte...
• BCFtools output tabular
  Hi, I'm sorry for my naive question (but this is my first analysis)... Analysis: 19 PCR targett...