I am using a HPC at my facility to cluster 8 denovo transcriptomes for downstream analysis using CD-HIT--EST-2D. Here is my script based on manual at:
cd-hit-est-2d -i BU_Trinity.fasta -i2 BS_Trinity.fasta -o SYZ1.fasta -c 0.95 -n 10 -d 0 -M 16000 - T 8
There is no error output so I can't work out the problem but it stops running as below.
Job Name: SYZ1_CD-HIT Execution terminated Exit_status=1 resources_used.cpupercent=0 resources_used.cput=00:00:00 resources_used.mem=0kb resources_used.ncpus=20 resources_used.vmem=0kb resources_used.walltime=00:00:02
Would be happy if anyone can spot anything wrong with my script? Many thanks in advance,