Question: An error systematiquely occurs with LastZ
0
gravatar for ed.dreuzy
2.8 years ago by
ed.dreuzy • 10
ed.dreuzy • 10 wrote:
Hi, 

Would you be aware of any issue with LastZ ? 
Here is the error message that I get when I run LastZ in order to map reads against reference and keep those with >90% identity

python: can't open file '/galaxy/main/migrated_tools/toolshed.g2.bx.psu.edu/repos/devteam/lastz/0801f8207d30/lastz/lastz_wrapper.py': [Errno 2] No such file or directory
/scratch/03166/xcgalaxy/main/staging/11712109/command.sh: line 40: /galaxy-repl/main/deps/samtools/0.1.18/env.sh: No such file or directory

 

Thanks,

Eman

tool software error • 624 views
ADD COMMENT • link • modified 2.8 years ago by Jennifer Hillman Jackson ♦ 25k • written 2.8 years ago by ed.dreuzy • 10
0
gravatar for Jennifer Hillman Jackson
2.8 years ago by
United States
Jennifer Hillman Jackson ♦ 25k wrote:

Hello,

Yes, this is a known issue. Please follow here for updates: https://github.com/jennaj/support-known-issues/wiki

Thanks, Jen, Galaxy team

ADD COMMENT • link written 2.8 years ago by Jennifer Hillman Jackson ♦ 25k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 169 users visited in the last hour