Question: An error systematiquely occurs with LastZ
0
gravatar for ed.dreuzy
2.8 years ago by
ed.dreuzy10
ed.dreuzy10 wrote:
Hi, 

Would you be aware of any issue with LastZ ? 
Here is the error message that I get when I run LastZ in order to map reads against reference and keep those with >90% identity

python: can't open file '/galaxy/main/migrated_tools/toolshed.g2.bx.psu.edu/repos/devteam/lastz/0801f8207d30/lastz/lastz_wrapper.py': [Errno 2] No such file or directory
/scratch/03166/xcgalaxy/main/staging/11712109/command.sh: line 40: /galaxy-repl/main/deps/samtools/0.1.18/env.sh: No such file or directory

 

Thanks,

Eman

tool software error • 624 views
ADD COMMENTlink modified 2.8 years ago by Jennifer Hillman Jackson25k • written 2.8 years ago by ed.dreuzy10
0
gravatar for Jennifer Hillman Jackson
2.8 years ago by
United States
Jennifer Hillman Jackson25k wrote:

Hello,

Yes, this is a known issue. Please follow here for updates: https://github.com/jennaj/support-known-issues/wiki

Thanks, Jen, Galaxy team

ADD COMMENTlink written 2.8 years ago by Jennifer Hillman Jackson25k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 169 users visited in the last hour