Question: Incorporation Of Stampy In Galaxy?
gravatar for Murilo Sena
8.1 years ago by
Murilo Sena10
Murilo Sena10 wrote:
Hi Galaxy Team, do you have any prevision of incorporating this new Illumina short reads mapper called Stampy ( Genome Res. <javascript:al_get(this, 'jour',="" 'genome="" res.');=""> 2010 Oct 27 Stampy: A statistical algorithm for sensitive and fast mapping of Illumina sequence reads.) in Galaxy? Has any galaxy user tried this new program? Thanks, Murilo -- Murilo Sena PhD Student Laboratory of Gene Expression in Eukaryotes Departamento de Bioquímica Instituto de Química Universidade de São Paulo Av. Prof. Lineu Prestes 748 sala 1200 05508-000 São Paulo, SP Brasil
galaxy • 621 views
ADD COMMENTlink modified 8.0 years ago by Jennifer Hillman Jackson25k • written 8.1 years ago by Murilo Sena10
gravatar for Jennifer Hillman Jackson
8.0 years ago by
United States
Jennifer Hillman Jackson25k wrote:
Hello Murilo, After checking in with the development team, I confirmed that there are no plans yet to incorporate this new tool. However the team agrees that it does look like a good fit with the current NGS analysis tool set. We encourage you (or anyone else interested) who has created a wrapper to please submit it to the Galaxy community Tool Shed: Thanks! Jen Galaxy team -- Jennifer Jackson
ADD COMMENTlink written 8.0 years ago by Jennifer Hillman Jackson25k
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