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Question: Problems with leftover tools in Galaxy
1
gravatar for stamente
3.0 years ago by
stamente • 10
European Union
stamente • 10 wrote:

Hi, I'm experiencing problem with liftover tool in Galaxy. After uploading an interval file, when I try to convert it in another genome version (e.g hg19 to hg18) I can't select the genome version in which convert. Seems that Galaxy do not recognize the input file as interval.

Why? How can I solve that?

Thank you in advance,

best regards

 

 

 

 

 
galaxy • 602 views
ADD COMMENT • link •
modified 3.0 years ago by Jennifer Hillman Jackson ♦ 25k • written 3.0 years ago by stamente • 10
0
gravatar for Jennifer Hillman Jackson
3.0 years ago by
Jennifer Hillman Jackson ♦ 25k
United States
Jennifer Hillman Jackson ♦ 25k wrote:

Hello,

The LiftOver tool has known issues at this time. Our team is actively working on a correction. Progress can be followed here: https://github.com/galaxyproject/galaxy/issues/1039

Thank you for reporting the problem!
ADD COMMENT • link written 3.0 years ago by Jennifer Hillman Jackson ♦ 25k
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