I'm using Galaxy public on a windows computer. The 'Count intervals in one file overlapping intervals in another file' tool displays error messages on file format in the history log, although I submit galaxy-generated or converted files that seem to me.
'Unexpected file format. Please use tab-delimited BED, GFF, or VCF. Perhaps you have non-integer starts or ends at line 1?
Any hint ?
Thanks al ot
Tool name: Count intervals in one file overlapping intervals in another file
Tool version: 0.1.0
Tool ID: toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_coveragebed_counts/0.1.0
ToolShed URL: https://toolshed.g2.bx.psu.edu/view/aaronquinlan/bedtools