Question: Galaxy Url for Fasta and Bed index files
0
asmariyaz23 • 10 wrote:
Hello,
What is an appropriate galaxy URL to use to obtain bed and fasta index files? I have tried below:
myGalaxy.org:port/dataset/get_metadata_file?hda_id=[fasta_dataset_id]&metadata_name=fasta.fai {for fasta index}
and
myGalaxy.org:port/dataset/get_metadata_file?hda_id=[bed_dataset_id]&metadata_name=bed.idx {for bed index}
While looking through metadata for both bed and fasta file at:
myGalaxy.org:port/api/histories/[history_id]/contents/[api_id]
I realized that it lacks a meta_files list which is unlike the case with bam files which is filled with bam_index. Is there a way to populate this list for bed and fasta files as well?
Thank you
Asma
