Question: Galaxy - Table Browser Fasta And Bef Format
gravatar for Rita Rebollo
6.8 years ago by
Rita Rebollo20
Rita Rebollo20 wrote:
Hello, I got an unexpected scientific result from a simple "get data" from UCSC table browser with galaxy. I have uploaded the mouse mm9 repeat masker track with a filtering on repClass = LINE SINE LTR DNA If I ask the output to be sequences, I will get 1 454 739 sequences, but if I ask the same data to be retrieved as a BED format I get roughly 3 600 000 which is the closest to the "summary/statiscs" of the dataset (item count = 3 493 484). Why is there a difference between the FASTA file and the BED file? Thank you Rita
galaxy • 802 views
ADD COMMENTlink written 6.8 years ago by Rita Rebollo20
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 168 users visited in the last hour