Question: Package Galaxy Utils error on installation
2
christophe.habib • 340 wrote:
Hello everyone,
Some tools need the package Galaxy Utils 1.0. Unfortunately this package can't be installed since the distribute egg have this error on building :
NameError: name 'sys_platform' is not defined
The full error is here :
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Downloading http://pypi.python.org/packages/source/d/distribute/distribute-0.6.38.tar.gz | |
| Extracting in /DATAS/user/galaxy/diag_19102015/tmp/tmpMqBBf7 | |
| Now working in /DATAS/user/galaxy/diag_19102015/tmp/tmpMqBBf7/distribute-0.6.38 | |
| Building a Distribute egg in /DATAS/user/galaxy/diag_19102015/database/tmp/tmp-toolshed-mtdcBbh8d/galaxy_sequence_utils-1.0.0 | |
| Traceback (most recent call last): | |
| File "setup.py", line 248, in <module> | |
| scripts = scripts, | |
| File "/usr/lib/python2.7/distutils/core.py", line 112, in setup | |
| _setup_distribution = dist = klass(attrs) | |
| File "/DATAS/user/galaxy/diag_19102015/tmp/tmpMqBBf7/distribute-0.6.38/setuptools/dist.py", line 225, in __init__ | |
| _Distribution.__init__(self,attrs) | |
| File "/usr/lib/python2.7/distutils/dist.py", line 287, in __init__ | |
| self.finalize_options() | |
| File "/DATAS/user/galaxy/diag_19102015/tmp/tmpMqBBf7/distribute-0.6.38/setuptools/dist.py", line 257, in finalize_options | |
| ep.require(installer=self.fetch_build_egg) | |
| File "/DATAS/user/galaxy/diag_19102015/tmp/tmpMqBBf7/distribute-0.6.38/pkg_resources.py", line 2027, in require | |
| working_set.resolve(self.dist.requires(self.extras),env,installer)) | |
| File "/DATAS/user/galaxy/diag_19102015/tmp/tmpMqBBf7/distribute-0.6.38/pkg_resources.py", line 2237, in requires | |
| dm = self._dep_map | |
| File "/DATAS/user/galaxy/diag_19102015/tmp/tmpMqBBf7/distribute-0.6.38/pkg_resources.py", line 2466, in _dep_map | |
| self.__dep_map = self._compute_dependencies() | |
| File "/DATAS/user/galaxy/diag_19102015/tmp/tmpMqBBf7/distribute-0.6.38/pkg_resources.py", line 2499, in _compute_dependencies | |
| common = frozenset(reqs_for_extra(None)) | |
| File "/DATAS/user/galaxy/diag_19102015/tmp/tmpMqBBf7/distribute-0.6.38/pkg_resources.py", line 2496, in reqs_for_extra | |
| if req.marker_fn(override={'extra':extra}): | |
| File "/DATAS/user/galaxy/diag_19102015/tmp/tmpMqBBf7/distribute-0.6.38/_markerlib/markers.py", line 109, in marker_fn | |
| return eval(compiled_marker, environment) | |
| File "<environment marker>", line 1, in <module> | |
| NameError: name 'sys_platform' is not defined | |
| /DATAS/user/galaxy/diag_19102015/database/tmp/tmp-toolshed-mtdcBbh8d/galaxy_sequence_utils-1.0.0/distribute-0.6.38-py2.7.egg | |
| Traceback (most recent call last): | |
| File "setup.py", line 9, in <module> | |
| use_setuptools() | |
| File "/DATAS/user/galaxy/diag_19102015/database/tmp/tmp-toolshed-mtdcBbh8d/galaxy_sequence_utils-1.0.0/distribute_setup.py", line 152, in use_setuptools | |
| return _do_download(version, download_base, to_dir, download_delay) | |
| File "/DATAS/user/galaxy/diag_19102015/database/tmp/tmp-toolshed-mtdcBbh8d/galaxy_sequence_utils-1.0.0/distribute_setup.py", line 132, in _do_download | |
| _build_egg(egg, tarball, to_dir) | |
| File "/DATAS/user/galaxy/diag_19102015/database/tmp/tmp-toolshed-mtdcBbh8d/galaxy_sequence_utils-1.0.0/distribute_setup.py", line 123, in _build_egg | |
| raise IOError('Could not build the egg.') | |
| IOError: Could not build the egg. |
I tried to uninstall/install again or to use the repair all repository function but it doesn't work.
I don't really understand this error and how to solve it to make the package available. Did you guys already see this?
Thank you for your help,
Christ
ADD COMMENT
• link
•
modified 3.1 years ago
by
Martin Čech ♦♦ 4.9k
•
written
3.1 years ago by
christophe.habib • 340
