Question: How can I choose tools/section order?
gravatar for christophe.habib
3.4 years ago by
christophe.habib340 wrote:

Hi everyone,

In my galaxy.ini I have defined this for tool_config_file :

tool_config_file = config/tool_conf.xml,config/shed_tool_conf.xml,config/lab_tool_conf.xml

At this point, it seems that the tools and section appear in the order they are written in the each file, and we have tool_conf tools first, shed_tool tools then, and at last lab_tool_tools.

Then I want to add a new tool with the toolshed, and I ask Galaxy to create a new section "NGS : Trimming" for example. This new tool and section are written at the end of the shed_tool_conf.xml file. Unfortunately when I look my galaxy instance this section appears after all the tools defined in the lab_tool_conf.xml.

I wonder how the tools and section are ordered within the tool panel. I already tried to modify shed_tool_conf.xml but it didn't work. How can I change the order of the section and tools ?

Thank you.


order tool panel • 1.1k views
ADD COMMENTlink modified 3.4 years ago by Jelle Scholtalbers360 • written 3.4 years ago by christophe.habib340
gravatar for Jelle Scholtalbers
3.4 years ago by
Jelle Scholtalbers360 wrote:

Hi Christ,

you will need to edit the integrated_tool_panel.xml as described here:

"A new file named integrated_tool_panel.xml has been introduced to define the arrangement for displaying these loaded items in your Galaxy tool panel"



ADD COMMENTlink written 3.4 years ago by Jelle Scholtalbers360
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