Question: Some Eggs Are Out Of Date (Not Really)
0
Pieter Neerincx • 360 wrote:
Hi,
I recently installed a new version of Galaxy on a server and now I
have the problem that Galaxy keeps complaining some eggs are out of
date. However this does not seem to be correct as I already have those
eggs. Galaxy will try to fetch them and fails with "Removed
conflicting egg...." This happens whenever I start Galaxy and even
when the daemon process is not running and I simply check the status.
See below for an example. Does anyone on the list know what is causing
this and how I can prevent this?
Cheers,
Pi
[root@app-prod-vh02 ~]# /nbic/prog/galaxy/run.sh --status
Some eggs are out of date, attempting to fetch...
Fetched http://eggs.g2.bx.psu.edu/new/Tempita/Tempita-0.1-py2.4.egg
Removed conflicting egg: /nbic/prog/galaxy/eggs/Tempita-0.1-py2.4.egg
Fetched http://eggs.g2.bx.psu.edu/new/lrucache/lrucache-0.2-py2.4.egg
Removed conflicting egg: /nbic/prog/galaxy/eggs/lrucache-0.2-py2.4.egg
Fetched
http://eggs.g2.bx.psu.edu/new/NoseHTML/NoseHTML-0.3.1-py2.4.egg
Removed conflicting egg:
/nbic/prog/galaxy/eggs/NoseHTML-0.3.1-py2.4.egg
Fetched http://eggs.g2.bx.psu.edu/new/Beaker/Beaker-1.4-py2.4.egg
Removed conflicting egg: /nbic/prog/galaxy/eggs/Beaker-1.4-py2.4.egg
Fetched http://eggs.g2.bx.psu.edu/new/WebError/WebError-0.8a-py2.4.egg
Removed conflicting egg: /nbic/prog/galaxy/eggs/WebError-0.8a-
py2.4.egg
Fetched http://eggs.g2.bx.psu.edu/new/twill/twill-0.9-py2.4.egg
Removed conflicting egg: /nbic/prog/galaxy/eggs/twill-0.9-py2.4.egg
Fetched
http://eggs.g2.bx.psu.edu/new/decorator/decorator-3.1.2-py2.4.egg
Removed conflicting egg:
/nbic/prog/galaxy/eggs/decorator-3.1.2-py2.4.egg
Fetched http://eggs.g2.bx.psu.edu/new/wsgiref/wsgiref-0.1.2-py2.4.egg
Removed conflicting egg:
/nbic/prog/galaxy/eggs/wsgiref-0.1.2-py2.4.egg
Fetched http://eggs.g2.bx.psu.edu/new/nose/nose-0.11.1-py2.4.egg
Removed conflicting egg: /nbic/prog/galaxy/eggs/nose-0.11.1-py2.4.egg
Fetch successful.
No PID file paster.pid
Biomolecular Mass Spectrometry & Proteomics group
Utrecht University
Visiting address:
H.R. Kruyt building room O607
Padualaan 8
3584 CH Utrecht
The Netherlands
Mail address:
P.O. box 80.082
3508 TB Utrecht
The Netherlands
phone: +31 6 143 66 783
email: pieter.neerincx@gmail.com
skype: pieter.online
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modified 8.4 years ago
by
Nate Coraor ♦ 3.2k
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written
8.5 years ago by
Pieter Neerincx • 360
