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Question: Tophat jobs waiting 48hrs
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gravatar for l.atkinson
3.7 years ago by
l.atkinson • 10
European Union
l.atkinson • 10 wrote:

Hi,

I have had a number of Tophat jobs queued for 48hrs now. Is there a long waiting time right now? I only have 18% storage left, I was worried that possibly they haven't started because there's not enough storage for them but I assumed they would run and just present an error message if that was the case?

Thanks in advance

Louise

 
tophat • 828 views
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modified 3.7 years ago • written 3.7 years ago by l.atkinson • 10
1

 

Hi Martin, 

Thanks for your reply - all my jobs are waiting nothing is running. They have been waiting to run since Monday now? I don't really know what to do for the best. Should I cancel them all and  queue them individually (I originally set up the jobs by selecting multiple datasets and executing them all together in a batch)?

Louise

ADD REPLY • link written 3.7 years ago by l.atkinson • 10

I checked our queue for your jobs and did not find any. Please try re-submitting them. Batch submission should not be the problem.
Just a quickcheck: you are using usegalaxy.org server, right?

ADD REPLY • link written 3.7 years ago by Martin Čech ♦♦ 4.9k

Hi Martin, 

Thanks for checking - I am on use galaxy.org, I will resubmit at some stage in the next few days. For now I'll delete those jobs off my history. Hopefully just a glitch.

Thanks again

Louise

 

 

 

ADD REPLY • link written 3.7 years ago by l.atkinson • 10
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gravatar for Martin Čech
3.7 years ago by
Martin Čech ♦♦ 4.9k
United States
Martin Čech ♦♦ 4.9k wrote:

Do you have any jobs running or are they all waiting? I think there is 1 'large' (e.g. tophat) job limit on usegalaxy.org

You are correct that jobs would run even if you have 1% of storage left and after the job finishes the qouta would be updated and future jobs prevented because of the quota limit.
ADD COMMENT • link written 3.7 years ago by Martin Čech ♦♦ 4.9k
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