Question: Join separate FASTA files; one which contains flanking regions and one with the regions of interest
1
mrn0032 • 10 wrote:
I have two separate FASTA files here on Galaxy
1. The genomic sequence of interest in a FASTA file
2. The upstream and downstream flanking regions of the sequences of interest in FASTA
Is there a way I can combine these FASTA files so the flanking regions are on either side of the appropriate sequence?
I also have both of these files in INTERVAL format with their genomic locations. So if I have to use the INTERVAL format then fetch the genomic sequence again that is another possibility.
ADD COMMENT
• link
•
modified 4.4 years ago
by
Bjoern Gruening ♦ 5.1k
•
written
4.4 years ago by
mrn0032 • 10
