Question: Converting Vcf To Gd_Genotype
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Mike Montague • 10 wrote:
I'm interested in using the Genomic Diversity tools. I've used these
with success for a previous project. For this current project, I've
converted a vcf file (29 subjects) to a gd_genotype file. When I
attempt
to specify individuals, the checkboxes for each subject are not
present.
Without specifying individuals, I am unable to complete other analyses
(overall FST, etc.)
I cannot distinguish a difference between the vcf files that were
successful from the previous project and this current project's vcf,
but
I assume there is a format difference that I cannot detect.
I'm using Galaxy at the main site. I executed the jobs on Fri Feb 21
22:09:49 2014 (UTC). I can share the histories of the projects if
necessary.
Mike
--
____________
Michael J. Montague, Ph.D.
Post-Doctoral Research Associate
The Genome Institute, Washington University School of Medicine
4444 Forest Park Avenue, Campus Box 8501
St. Louis, MO 63108
T. 718.809.4093
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modified 4.8 years ago
by
Jennifer Hillman Jackson ♦ 25k
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written
4.8 years ago by
Mike Montague • 10
