Question: .Bam File Upload And Use Problem
gravatar for Lu, Yuan (MU-Student)
4.7 years ago by
United States
Lu, Yuan (MU-Student)20 wrote:
Recently I was trying to use Galaxy for my data analysis but ran into problems..... Condition: I used galaxy server at PSU. I tried load local .bam file directly to galaxy, I also tried FTP, but both ways resulted into the same outcome. The .bam files I was using are pure .bam files with no index. Problems: 1.After I load them, the file was recognized as .txt file, and it is "empty" (But it did take long time to upload to FTP ~1GB), in the annotation window, it shows "The uploaded binary file contains inappropriate content" 2. I tried to convert the file to .bam format, it returns "An error occurred setting the metadata for this dataset. You may be able to set it manually or retry auto-detection." Anyone know how to solve this problem? Y.L.
galaxy • 974 views
ADD COMMENTlink modified 4.7 years ago by Jennifer Hillman Jackson25k • written 4.7 years ago by Lu, Yuan (MU-Student)20
gravatar for Jennifer Hillman Jackson
4.7 years ago by
United States
Jennifer Hillman Jackson25k wrote:
Duplicate, please see: user/2013-December/006988.html -- Jennifer Hillman-Jackson
ADD COMMENTlink written 4.7 years ago by Jennifer Hillman Jackson25k
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