Question: Tophat Issues
0
miroslav.sotak • 20 wrote:
To whom it may concern
I do have a problem with tophat. I can easily put fastq data to
"history" and according to RNA-seq Analysis Exercise provided by
Jeremy.
We checked the type of Ascii ofset for the quality estimation. I tried
even "quality data converter" set to 33 (we do have data of this ASCII
offset from 2 different sources) but "tophat for Illumina" simply can
not read the data before and even after quality format converter. We
do
not have any idea what is going on. I am logged in Galaxy with current
email, can you check my data and is there any converter for quality
offset?
Sincerely
Miro Sotak
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modified 5.0 years ago
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Jennifer Hillman Jackson ♦ 25k
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written
5.0 years ago by
miroslav.sotak • 20
