Question: Should I Run Fastq Groomer?
0
Du, Jianguang • 380 wrote:
Dear All,
I have some FASTQ datasets in phred 33 offset, and I have already
assinged them Fastqsanger format. Do I need to run FASTQ Groomer on
these datasets before I check the data quality by "Fastqc: Fastqc QC"
and "FASTQ Trimmer by column" to remove bad nucleotides at 3' end of
reads?
Should I select "Sanger" as "Input FASTQ quality scores type:" if I
need to run Groomer?
Thanks.
Jianguang Du
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modified 6.3 years ago
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Jennifer Hillman Jackson ♦ 25k
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6.3 years ago by
Du, Jianguang • 380
