Question: Fastq Quality Stats & Bowtie
gravatar for Sharmistha Majumdar
5.4 years ago by
Sharmistha Majumdar10 wrote:
Hi, I am a new Galaxy user and still navigating the platform. Can you explain the difference between these 2 operations that the instruction video asks us to perform before submitting to Bowtie? *NGS: QC and manipulation>Illumina data>FASTQ Summary Statistics by column *FASTX-Toolkit for FASTQ data> Compute quality statistics Also, does Galaxy use Bowtie 2.1.0 or earlier versions? Thanks SM
alignment bowtie • 991 views
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