Question: Fastq Quality Stats & Bowtie
0
Sharmistha Majumdar • 10 wrote:
Hi,
I am a new Galaxy user and still navigating the platform. Can you
explain the difference between these 2 operations that the instruction
video asks us to perform before submitting to Bowtie?
*NGS: QC and manipulation>Illumina data>FASTQ Summary Statistics by
column
*FASTX-Toolkit for FASTQ data> Compute quality statistics
Also, does Galaxy use Bowtie 2.1.0 or earlier versions?
Thanks
SM