Question: Boxplot Visualization Error
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柴田 弘紀 • 20 wrote:
Hello, I'm pretty new for Galaxy. I am running a local Galaxy server on Mac. I tried to draw a boxplot from summary statistics created from groomed fastq data. Then I got error message as follows: An error occurred running this job: gnuplot> set term png size 2048,768 ^ line 0: unknown or ambiguous terminal type; type just 'set terminal' for a list line 0: warning: Too many axis ticks requested (>1e+02) Error running gnuplot. I believe gnuplot was appropriately installed using MacPorts (confrimed it starts when I type "gnuplot" on terminal). I also installed libpng by Macports and now "png" is listed when I type "set terminal" in gnuplot for a list. How can I help it??? Thank you very much. Hiroki
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modified 4.3 years ago
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Martin Čech ♦♦ 4.9k
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6.0 years ago by
柴田 弘紀 • 20
The job is likely too large. Using charts as suggested in the original reply is a great alternative, as is using FastQC. Best, Jen, Galaxy team