Question: Error Message When Importing Gc Content
0
Ross Hardison • 270 wrote:
When I use the Table Browser proxy in Galaxy to import data on "GC
content in 5bp intervals", I get the data I want (in wiggle format).
However, the information associated with the query in Galaxy says:
3: UCSC: gc5Base (chr16:1-500000)
error, format: wig, database: hg17
Info: Errors: (line
100010)---------------------------------------------------------------
--
100013)---------------------------------------------------------------
--
As far as I can tell, the data are there and are OK (it converts from
wiggle to BED OK, and the expected 100,000 lines are present).
It is disconcerting to users to get the error message.
Thanks,
Ross
Ross Hardison
T. Ming Chu Professor of Biochemistry and Molecular Biology
The Pennsylvania State University
304 Wartik Laboratory
University Park, PA 16802
e-mail: rch8@psu.edu
phone: 814-863-0113 FAX: 814-863-7024
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modified 12.1 years ago
by
Dan Blankenberg • 130
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written
12.1 years ago by
Ross Hardison • 270
