Question: Issue with pipeline of Identification of SNPs
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gravatar for abdul.suboor123
8 days ago by
abdul.suboor1230 wrote:

graphic

I am doing identification of SNPs with usegalaxy.org , while in step realignment step the "using reference genome" is creatina g problem, even I have the reference genome available but there is nothing and blank place without any option of selecting any genome. I want to know what should I do now?

software error snp galaxy • 52 views
ADD COMMENTlink modified 8 days ago by Jennifer Hillman Jackson25k • written 8 days ago by abdul.suboor1230
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gravatar for Jennifer Hillman Jackson
8 days ago by
United States
Jennifer Hillman Jackson25k wrote:

Hello,

The problem may be with the content or format of the custom genome/build, or it may be with GATK tools (if used).

Please see these recent prior Q&A for more help:

Thanks! Jen, Galaxy team

ADD COMMENTlink written 8 days ago by Jennifer Hillman Jackson25k
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