Question: How to change label id within integrated_tool_panel.xml for local galaxy instance?
0
purvakulkarni7 • 10 wrote:
Hi,
I am running a local galaxy instance. I recently installed multiple tools within this instance using the tool shed. However, all the recently installed tools are present under the header "DEPRECATED". Why is it so? When I try add a new header for this set of tools in the integrated_tool_panel.xml, the changes are not reflected in the local galaxy instance. Could someone help me with this?
Currently the part of the integrated_tool_panel.xml looks like the following:
<label id="deprecated" text="DEPRECATED" version="" />
<section id="gatk" name="NGS: GATK Tools (beta)" version="">
</section>
<section id="preprocessing" name="Preprocessing" version="">
<tool id="toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_group/abims_xcms_group/2.1.1" />
<tool id="toolshed.g2.bx.psu.edu/repos/mmonsoor/camera_combinexsannos/abims_CAMERA_combinexsAnnos/2.2.2" />
<tool id="toolshed.g2.bx.psu.edu/repos/lecorguille/camera_annotate/abims_CAMERA_annotateDiffreport/2.2.2" />
</section>
And, I am making the following change to it (see line 4 of the code):
<label id="deprecated" text="DEPRECATED" version="" />
<section id="gatk" name="NGS: GATK Tools (beta)" version="">
</section>
<label id="massspectratools" text="MASS SPECTRA TOOLS" version="" />
<section id="preprocessing" name="Preprocessing" version="">
<tool id="toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_group/abims_xcms_group/2.1.1" />
<tool id="toolshed.g2.bx.psu.edu/repos/mmonsoor/camera_combinexsannos/abims_CAMERA_combinexsAnnos/2.2.2" />
<tool id="toolshed.g2.bx.psu.edu/repos/lecorguille/camera_annotate/abims_CAMERA_annotateDiffreport/2.2.2" />
</section>