Question: [Galaxy] Galaxy Workflows Are Here
0
Anton Nekrutenko ♦ 1.7k wrote:
Dear Galaxy User:
Galaxy has just been upgraded with the most radical feature since its
conception. It now features WORKFLOWS!
Now you can:
1. Construct workflows by example
=================================
Suppose you have just performed an analysis and now you want to re-
run it again, modify its parameters, or use different input datasets.
Previously (15 min ago) you would have had to redo it again. But now
you can simply convert you existing history into a workflow!
Watch how to construct workflow from a history here:
http://screencast.g2.bx.psu.edu/galaxy/WorkFlow_SC4/
Watch how to modify workflow's parameters here:
http://screencast.g2.bx.psu.edu/galaxy/WorkFlow_SC5/
2. Construct workflows from scratch
===================================
Galaxy now features an interactive workflow editor where things can
be dragged around and connected.
Watch how here:
http://screencast.g2.bx.psu.edu/galaxy/WorkFlow_SC7/
3. Make custom tools out of workflows
=====================================
If you have a workflow that you want to use over and over again, you
can now put it on the tool menu.
Watch how here:
http://screencast.g2.bx.psu.edu/galaxy/WorkFlow_SC6/
Finally, if you collaborate with someone, just share your workflows
with that person. It is as easy as sharing histories.
Workflows are in beta
Workflow support is currently in beta testing. Workflows may not work
with all tools, may fail unexpectedly, and may not be compatible with
future updates to Galaxy. If you encounter abnormal behavior, e-mail
us to galaxy-bugs@bx.psu.edu.
More on Galaxy
To learn more about galaxy see here:
http://galaxy.psu.edu
and here:
http://galaxy.psu.edu/screencasts.html
anton nekrutenko
on behalf of Galaxy Team (http://g2.trac.bx.psu.edu/wiki/GalaxyTeam)
Anton Nekrutenko
Asst. Professor
Department of Biochemistry and Molecular Biology
Center for Comparative Genomics and Bioinformatics
Penn State University
anton@bx.psu.edu
http://nekrut.bx.psu.edu
814.865.4752