Question: Another way to collapse sequences
gravatar for Briony
7 months ago by
Briony10 wrote:


Just trying to collapse my sequences down, however I noticed the Collapse Sequence feature only collapses sequences that have 100% homology. Is there a way to change this or is there another feature I could use to collapse sequences based on say 98% homology?

Thank you for your help.

collapse reads galaxy • 226 views
ADD COMMENTlink modified 7 months ago by Jennifer Hillman Jackson25k • written 7 months ago by Briony10
gravatar for Jennifer Hillman Jackson
7 months ago by
United States
Jennifer Hillman Jackson25k wrote:


This tool only finds exact matches. Grouping complete sequences based on homology is a much more complicated task and would include either assembly or mapping to a reference database.

Galaxy tutorials:

Thanks! Jen, Galaxy team

ADD COMMENTlink written 7 months ago by Jennifer Hillman Jackson25k
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