Question: Has the operate on genomic intervals - intersect feature been removed?
0
gravatar for zachary.gaber
3.5 years ago by
United Kingdom
zachary.gaber • 80 wrote:

Hello,

The intersect tool under "Operate on Genomic Intervals" has suddenly disappeared.  Is this a bug or was the tool intentionally removed?  Either way it's a shame as it was one of the tools I used all the time. 

 

Can anyone suggest a comparable tool for identifying regions in a BED file that overlap with regions in another BED file?  It seems to me that the BEDTools "Intersect Multiple Sorted BED Files" might be usable, but it reports a lot of information I don't need or want and makes the task of identifying overlap far more laborious.  Thanks!

 

software error galaxy • 815 views
ADD COMMENT • link • modified 3.5 years ago • written 3.5 years ago by zachary.gaber • 80
0
gravatar for zachary.gaber
3.5 years ago by
United Kingdom
zachary.gaber • 80 wrote:

The intersect tool suddenly reappeared but didn't work and when I reloaded the Galaxy page it was gone again.

ADD COMMENT • link modified 3.5 years ago • written 3.5 years ago by zachary.gaber • 80
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