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Question: (Closed) Memory allocation error while trying to align paired end reads using RNA STAR
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gravatar for skumar53
7 months ago by
skumar53 • 30
skumar53 • 30 wrote:

Hi

This is my first time using Galaxy for RNA Seq analysis. After uploading and normalizing my reference genome, I tried to align my paired-end fastq reads to this genome using RNA STAR. Unfortunately, the jobs failed with the error " This job was terminated because it used more memory than it was allocated". Can someone help me with this while also letting me know how much space I can use on Galaxy?

Thanks!
memory star alignment rna-seq hisat2 • 244 views
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written 7 months ago by skumar53 • 30

Hello skumar53!

Questions similar to yours can already be found at:

We have closed your question to allow us to keep similar content in the same thread.

If you disagree with this please tell us why in a reply below. We'll be happy to talk about it.

Cheers!

PS: The job is running out of memory during execution. Please see the help in the prior Q&A.
ADD REPLY • link written 7 months ago by Jennifer Hillman Jackson ♦ 25k
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