Question: Reference genome from data visualization
0
gravatar for kry_8
6 months ago by
kry_810
kry_810 wrote:

Hi

What I have seen in the tutorials is that you can see the FreeBayes results in IGV but only after selecting the reference genome from the option database when it has a question mark in your history results. But when I do that my reference genome is not in the list and I cannot select it from History, as I would do it with the rest of tools, even when I have FTP the reference genome. Is there a way to include it in the list of database/build so I can change the edit the database/build from the option Edit Dataset Attributes.

https://vimeo.com/123436423 (specifically minute 02:27 to 02:33)

Thanks!!

alignment • 218 views
ADD COMMENTlink modified 6 months ago by Jennifer Hillman Jackson25k • written 6 months ago by kry_810
0
gravatar for Jennifer Hillman Jackson
6 months ago by
United States
Jennifer Hillman Jackson25k wrote:

Hello,

Your custom genome can be promoted to a custom build. This places it in the genome/builds list where it can be assigned as a database.

FAQs: https://galaxyproject.org/support/

Thanks! Jen, Galaxy team

ADD COMMENTlink written 6 months ago by Jennifer Hillman Jackson25k
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