Question: Reference genome from data visualization
0
gravatar for kry_8
25 days ago by
kry_810
kry_810 wrote:

Hi

What I have seen in the tutorials is that you can see the FreeBayes results in IGV but only after selecting the reference genome from the option database when it has a question mark in your history results. But when I do that my reference genome is not in the list and I cannot select it from History, as I would do it with the rest of tools, even when I have FTP the reference genome. Is there a way to include it in the list of database/build so I can change the edit the database/build from the option Edit Dataset Attributes.

https://vimeo.com/123436423 (specifically minute 02:27 to 02:33)

Thanks!!

alignment • 68 views
ADD COMMENTlink modified 25 days ago by Jennifer Hillman Jackson24k • written 25 days ago by kry_810
0
gravatar for Jennifer Hillman Jackson
25 days ago by
United States
Jennifer Hillman Jackson24k wrote:

Hello,

Your custom genome can be promoted to a custom build. This places it in the genome/builds list where it can be assigned as a database.

FAQs: https://galaxyproject.org/support/

Thanks! Jen, Galaxy team

ADD COMMENTlink written 25 days ago by Jennifer Hillman Jackson24k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 91 users visited in the last hour