Question: vcftools - errors running vcf-merge
0
rich_jp • 0 wrote:
Hi all,
I am trying to run the vcf-merge tool, which depends on the vcftools 0.1.11 package and tabix (with installed via toolshed) on a local Galaxy server. I keep getting error messages such as the following:
Log: tool progress gunzip: error writing to output: Broken pipe gunzip: 0.vcf.sorted.gz: uncompress failed Using column name 'mutant' for 0.vcf.sorted.gz:mutant Using column name 'sibling' for 0.vcf.sorted.gz:sibling gunzip: error writing to output: Broken pipe gunzip: 1.vcf.sorted.gz: uncompress failed Using column name '1.vcf.sorted_mutant' for 1.vcf.sorted.gz:mutant Using column name '1.vcf.sorted_sibling' for 1.vcf.sorted.gz:sibling
Does anyone have nay idea how to solve this?
Thanks, Richard
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modified 18 months ago
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Jennifer Hillman Jackson ♦ 25k
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written
18 months ago by
rich_jp • 0
