Question: TopHat analysis has been taking long time
19 months ago by
lisa.kashima • 0
lisa.kashima • 0 wrote:
I started TopHat analysis on April 15th. Howevere, the job is still working (today is April 26th) and have not done, yet. I used same reference genome and similar sample data. Therefore, I don't think my BAM file or reference genome data have a problem. I'm wondering whether there is any problem with Galaxy server. I would like to know any suggstion to complete the analysis.
Thank you for your help and time.
ADD COMMENT • link •modified 19 months ago by Jennifer Hillman Jackson ♦ 25k • written 19 months ago by lisa.kashima • 0
That is too long for a job to stay queued at http://usegalaxy.org unless it is really paused instead because of a problem with the inputs. Would you please send a share link to the history to the firstname.lastname@example.org mailing list so we can take a look? This is a private list - your data will not be shared publically that way.
How to share: https://galaxyproject.org/learn/share/
Send the history link plus a link to this question, so we can associate the two. Thanks, Jen, Galaxy team