Question: Galaxy history not showing collections
0
Coryzaa • 10 wrote:
Hi,
I can't figure out what I'm doing wrong... trying to run a basic script that produces multiple variable outputs. All this output should be flushed back to the history and as far as I understand It would be easily doable with collections. However no matter what I try (even simple examples); the collection doesn't show in my history. Hereby my code... hopefully someone figures out what I'm doing wrong.
<tool id="splitFasta" name="FASTA: Split" version="1.0" force_history_refresh="True">
<description>This tool splits a FASTA file in chunks.</description>
<command interpreter="sh"> splitFasta.sh $input $number; mkdir test; touch test/monkey.txt </command>
<inputs>
<param name="input" type="data" label="Input FASTA file" help="The selected FASTA file should contain multiple sequences with a corresponding header."/>
<param name="number" type="text" label="Number of chunks" help="The selected FASTA file will be divided into the selected number of chunks."/>
</inputs>
<outputs>
<data name="log" format="log" label="Analysis log" />
<collection name="output1" type="list" label="Split">
<discover_datasets ext="txt" directory="test" visible="True" />
</collection>
</outputs>
</tool>
In this particular case my history only shows "Analysis.log".