Similar posts • Search »

• Upgrading My Local Galaxy Install
  Hi, I have upgraded my local install by getting the latest source like this: hg pull -u the...
• Install Tools On Cluster
  Hi, I am learning how to install and configure Galaxy on our computer cluster. Many third party ...
• Re: Galaxy-User Digest, Vol 26, Issue 6
  Michael, I don't have any experience with Condor, but we're finding that the Galaxy framework sca...
• Cloudman - Startup Options - Galaxy Cluster Vs Data Cluster
  Hi guys, When I first go to my cloudman page at /cloud I get a dialog asking for some settings. ...
• Galaxy SGE Cluster, Planemo testing?
  Hi, Is it possible to use "planemo test" functionality on an SGE cluster? I can correctly run a ...
• Not seeing any tools in local galaxy setup
  Hi. I have cloned the galaxy-dist repo to a cluster I have access to. On that cluster we have lo...
• Fwd: Problem In Set-Up Of "Coverage" Operation
  I just noticed that this is fixed on Galaxy2.2-test, but it is not fixed on Galaxy2.1ENCODE. My u...
• Re: [Galaxy-Lab] [Galaxy-Dev] Wiki Erratum...] + Cloud Question
  Hi Richard, Please see some comments below. Currently, Galaxy Cloud allows a cluster to be comp...
• Conditional Cluster/Merge
  Hi, I have a dataset of some 1000 individuals and I'd like to merge consecutive intervals within ...
• Select Tophat And Cufflinks
  Hi,   I'm a user of galaxy.As I know, when TopHat and Cufflinks are supported through Galaxy, its...
• Can I get back "Operate on Genomic Interval" on local Galaxy instance?
  After updating to a recent version, Operate on Genomic Interval was gone.  I tried to download an...
• Megablast Wrapper
  Hi, Just wanted to let you know that I had some problems with using the Megablast wrapper in the...
• TopHat jobs failing - Failed to find or download one or more job outputs from remote server.
  Hi, I seem to be running into a problem on the galaxy test server (due to availability of a new g...
• Cloudman - Problem Starting Shared Cluster
  Hi guys, After launching Cloudman on the Initial Cluster Configuration dialog I selected the "Sh...
• Adding tests for unformated HTML output
  Hi, I am currently adapting version 0.11.2 of FastQC as a Galaxy tool, as we want to include it ...
• Fastq Quality Stats & Bowtie
  Hi, I am a new Galaxy user and still navigating the platform. Can you explain the difference bet...
• 2.2 Test Problem On Mac
  Hi, I work on a mac, and find that the 2.2 test version of Galazy doesn't work (specifically, a ...
• Some tools in the category "Operate on Genomic Intervals" are missing
  Dear All, I noticed that some tool in the category "Operate on Genomic Intervals" are now missin...
• Install common tools into expected locations
  Hi, I"m interested in setting up a local install of galaxy on our cluster. After doing a local ...
• Running tests for my tools.xml
  It's not clear to me how I can run the `` for the tools.xml I've created. My tools require an en...