Question: Installing Tools from ToolShed? (some are slow some are missing dep.)
23 months ago by
vebaev • 130
vebaev • 130 wrote:
I'm using latest stable Galaxy Docker Build and installing some tools.... While some install with no problem (green Installed), some are freezed on New, Installing tools dependencies and Missing tools dependencies. I do not know what is the avarage time but I had for 1-2 hours now the "suite_cufflinks" on "new" and some of the components are marked as "missing dep.." - (package_zlib_1_2_8). What is the best way to continue? Uninstall them and search for another version?
ADD COMMENT • link •modified 23 months ago by Bjoern Gruening ♦ 5.1k • written 23 months ago by vebaev • 130
Have a look at
topinside the container and see if it's still running or not. I've occasionally had tool installations crash.
I have quite inconsistent results each time, for different versions or tools. It seems installing tools is such a challenge? Is this normal behavior?
can you try again, I have updated the zlib packages.