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  Dear all, I'm in the process of trying to figure out the 'best' method for looking at SNP/varian...
• How To Find Out Snps And Point Mutations In Rna-Seq Data Using Galaxy?
  HI, I am new to the RNA-seq, and the only available sources for me to do analysis is the Galaxy s...
• Galaxy Workshops @ Agronony, Crop and Soil Science Meeting in November
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  Hey, I was doing a tutorial For SNP detection. I was using the freebayes and VCFfilter using hg1...
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  Hi All,   I have a question about the NGS: Indel analysis and SNP Calling.   Assuming I...
• SNP names not lining up with VCF data and locations
  Analysis of my SNP names obtained from UCSC Main with the locations of my VCF data shows that the...
• Generating Pileup For Snp Analysis
  I am a new user to Galaxy, and I was hoping someone might be able to help with this small problem...
• Flanking regions from SNP list
  Hello  Using the RNA seq data and have performed de novo assembly with non-model species. I have...
• Snp Finding
  Dear galaxy users, We have done deep sequencing on some known genomic loci using Hiseq2000. I...
• Extracting reads from SNP list
  Hi Galaxy experts I am working on a non-model species and have created a denovo transcriptome as...
• BCFtools output tabular
  Hi, I'm sorry for my naive question (but this is my first analysis)... Analysis: 19 PCR targett...
• Extracting reads from SNP list
  Hi Galaxy experts I am working on a non-model species and have created a denovo transcriptome as...
• obtaining SNP/SNVs from vcf or BAM files with galaxy?
  Hi there! I am working on a project identifying SNPs/SNVs of a few sequences and was wondering i...