Question: (Closed) Extracting reads from SNP list
gravatar for d.angra
3.4 years ago by
United Kingdom
d.angra50 wrote:

Hi Galaxy experts

I am working on a non-model species and have created a denovo transcriptome assembly from more than 10 datasets, in order to identify SNPs. I have used galaxy to successfully obtain a list of good quality, high confidence SNPs. Now I need to extract the reads from the SNP list. Can any of you please advice me on tools to use in galaxy to help me achieve this?


Thanks in advance



snp • 797 views
ADD COMMENTlink written 3.4 years ago by d.angra50

Hello d.angra!

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ADD REPLYlink written 3.4 years ago by Jennifer Hillman Jackson25k
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