Question: empty QUAL filed in Naive Variant caller vcf output
1
gravatar for ambi1999
17 months ago by
ambi199930
ambi199930 wrote:

Hi,

The QUAL field in vcf output of Naive Variant Caller is empty for all the variants. Any reason? Attached is screenshot of the vcf. I will email my galaxy history link to galaxy-bugs@lists.galaxyproject.org, and include a link to this post so you can associate the two.

Note: I do get QUAL values if I run FreeBayes tool.

enter image description here

Thanks for your help.

Cheers, Ambi.

ADD COMMENTlink modified 17 months ago • written 17 months ago by ambi199930

Thanks for the bug report. We'll be looking at it once http://usegalaxy.org is back up (excepted to be around 5pm EST). Thanks! Jen, Galaxy team

ADD REPLYlink written 17 months ago by Jennifer Hillman Jackson24k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 79 users visited in the last hour