I have my DamID data (corrected by GATC fragments). I have two bams for Dam alone protein (the control) and the Dam-fusion protein (the experiment). Now I want to make peak calling, and normalize and visualize the data (for example, see a locus and in the same graph see the Dam-fusion signal corrected or substracted, with negative and positive axis), to see exactly how is the peak in every loci of intered.
Any sugestions to star with this?
Thanks a lot.