Question: Code file that depends on tool's tool dependency
0
gravatar for katherine.beaulieu014
2.4 years ago by
katherine.beaulieu01480 wrote:

Hi there, I am trying to create a dynamic select list for a galaxy tool. It uses a function in a code file which I have added to the tool config file using the "< code file= />" tag. The problem is that this code file has the same dependencies as the tool I am trying to install so it can't load as the dependencies haven't been resolved yet. Does anyone have an idea of what to do in this situation?

tool irods galaxy • 603 views
ADD COMMENTlink modified 2.4 years ago • written 2.4 years ago by katherine.beaulieu01480
0
gravatar for Bjoern Gruening
2.4 years ago by
Bjoern Gruening5.1k
Germany
Bjoern Gruening5.1k wrote:

The only way I see it to install the dependencies in the Galaxy venv. Tool dependencies are resolved at runtime but you are before this point. Sorry.

ADD COMMENTlink written 2.4 years ago by Bjoern Gruening5.1k
0
gravatar for katherine.beaulieu014
2.4 years ago by
katherine.beaulieu01480 wrote:

Ok thanks for the information

ADD COMMENTlink written 2.4 years ago by katherine.beaulieu01480
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